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Ueno, H., A. Bracco, J. A. Barth, M. V. Budyansky, D. Hasegawa, S. Itoh, S. Y. Kim, C. Ladd, X. Lin, Y.-G. Park, S. Prants, T. Ross, I. Rypina, Y. Sasai, O. O. Trusenkova, E. I. Ustinova and Y. Zhong, 2022. Review of oceanic mesoscale processes in the North Pacific: physical and biogeochemical impacts. Prog. Oceanogr.,

Boyer, T., H.-M. Zhang, K. O’Brien, J. Reagan, S. Diggs, E. Freeman, H. Garcia, E. Heslop, P. Hogan, B. Huang, L.-Q. Jiang, A. Kozyr, C. Liu, R. Locarnini, A. V. Mishonov, C. Paver, Z. Wang, M. Zweng, S. Alin, L. Barbero, J. A. Barth, M. Belbeoch, J. Cebrian, K. Connell, R. Cowley, G. Goni, F. Katz, M. Kramp, A. Kumar, D. Legler, R. Lumpkin, C. R. McMahon, D. Pierrot, A. J. Plueddemann, E. A. Smith, A. Sutton, V. Turpin, L. Jiang, V. Suneel, R. Wanninkhof, R. A. Weller and A. P. Wong, 2022. Effects of the pandemic on observing the global ocean. Bull. Amer. Meteor. Soc.,

Moser, M. L., D. Erickson, S. Corbett, J. A. Barth, A. Erofeev, and S. D. Pierce, 2022. Detecting acoustically-tagged green sturgeon in the northeast Pacific ocean. Environmental Biology of Fishes,

Rivers, J. W., J. Bailey Guerrero, R. D. Brodeur, G. K. Krutzikowsky, L. J. Adrean, S. A. Heppell, K. C. Jacobson, K. Milligan, S. K. Nelson, D. D. Roby, W. J. Sydeman, L. G. Torres, and J. A. Barth, 2022. Critical research needs for forage fish within inner-shelf marine ecosystems. Fisheries,

Whitefield, C. R., C. Braby, and J. A. Barth, 2021. Capacity building to address ocean change: Organizing across communities of place, practice and governance to achieve ocean acidification and hypoxia resilience in Oregon. Coastal Management, 49:5, 532-546, .

Révelard, A., J. Tintoré, J. Verron, P. Bahurel, J. A. Barth, M. Belbéoch, J. Benveniste, P. Bonnefond, E. P. Chassignet, S. Cravatte, F. Davidson, B. deYoung, M. Heupel, E. Heslop, C. Hörstmann, J. Karstensen, P. Y. Le Traon, M. Marques, C. McLean, R. Medina, T. Paluszkiewicz, A. Pascual, J. Pearlman, G. Petihakis, N. Pinardi, S. Pouliquen, R. Rayner, L. Shepherd, J. Sprintall, T. Tanhua, P. Testor, J. Seppälä, J. Siddorn, S. Thomsen, L. Valdés, M. Visbeck, A. M. Waite, F. Werner, J. Wilkin, and B. Williams, 2021. Ocean Integration: the needs and challenges of effective integration within the ocean observing system. Front. Mar. Sci., 8,

McSweeney, J. M., M. R. Fewings, J. A. Lerczak and J. A. Barth, 2021. The evolution of a northward-propagating buoyant coastal plume after a wind relaxation event. J. Geophys. Res., 126, e2021JC017720,

Spydell, M. S., S. H. Suanda, D. Grimes, J. McSweeney, J. Lerczak, J. MacMahan, M. Moulton, C. Chickadel, J. MacKinnon, A. Waterhouse, J. Thomson, R. Romeiser, J. Colosi, J. Calantoni, J. Becherer, J. A. Barth and F. Feddersen, 2021. Internal bore evolution across the shelf near Pt. Sal, CA, interpreted as a gravity current. J. Phys. Oceanogr., 51, 3629-3650,

Kumar, N., J. A. Lerczak, T. Xu, A. Waterhouse, J. Thomson, E. Terrill, S. Suanda, M. Spydell, P. Smit, A. Simpson, R. Romeiser, T. de Paolo, A. Palóczy, S. D. Pierce, A. O’Dea, L. Nyman, J. Moum, M. Moulton, A. M. Moore, A. Miller, R. Mieras, K. Melville, J. McSweeney, J. MacMahan, J. MacKinnon, L. Lenain, M. Kovatch, T. Janssen, S. Haney, M. Haller, K. Haas, D. Grimes, H. Graber, M. Gough, D. Fertitta, F. Feddersen, C. A. Edwards, E. Di Lorenzo, J. Colosi, C. Chickadel, S. Celona, J. Calantoni, J. Becherer, J. A. Barth, and S. Ahn, 2021. The Inner-shelf Dynamics Experiment. Bull. Amer. Meteor. Soc.,

McCammon, S., G. M. dos Santos, M. Frantz, T. P. Welch, G. Best, R. K. Shearman, J. D. Nash, J. A. Barth, J. A. Adams and G. A. Hollinger, 2021. Ocean front detection and tracking using a team of heterogeneous marine vehicles. J. Field Robotics, 38, 854–881,

Haney, S., A. Simpson, J. McSweeney, A. F. Waterhouse, M. C. Haller, J. A. Lerczak, J. A. Barth, L. Lenain, A. Palóczy, K. Adams, and J. A. MacKinnon, 2021. Lifecycle of a submesoscale front birthed from a nearshore internal bore. J. Phys. Oceanogr., 51, 3477-3493,

Becherer, J., J. N. Moum, J. Calantoni, J. A. Colosi, J. A. Barth, J. A. Lerczak, J. M. McSweeney, J. A. MacKinnon, and A. F. Waterhouse, 2020. Saturation of the internal tide over the inner continental shelf. Part 2: Parameterization. J. Phys. Oceanogr., 51, 2565-2582.

Becherer, J., J. N. Moum, J. Calantoni, J. A. Colosi, J. A. Barth, J. A. Lerczak, J. M. McSweeney, J. A. MacKinnon, and A. F. Waterhouse, 2020. Saturation of the internal tide over the inner continental shelf. Part 1: Observations. J. Phys. Oceanogr., 51, 2553-2563, .

McSweeney, J. M., J. A. Lerczak, J. A. Barth, J. Becherer, J. A. MacKinnon, A. F. Waterhouse, J. A. Colosi, J. H. MacMahan, F. Feddersen, J. Calantoni, A. Simpson, S. Celona, M. Haller and E. Terrill, 2020. Alongshore variability of shoaling internal bores on the inner shelf. J. Phys. Oceanogr., 50, 2965-2981,

McSweeney, J. M., J. A. Lerczak, J. A. Barth, J. Becherer, J. A. Colosi, J. A. MacKinnon, J. H. MacMahan, J. N. Moum, S. D. Pierce, and A. F. Waterhouse, 2020. Observations of shoaling internal bores and nonlinear internal waves across the central California inner shelf. J. Phys. Oceanogr., 50, 111-132,

McCammon, S., T. P. Welch, C. M. Waluk, K. Benoit-Bird, J. A. Barth, and G. A. Hollinger, 2019. Onboard autonomy system for the Slocum glider. OCEANS 2019 MTS/IEEE SEATTLE, Seattle, WA, USA, 2019, pp. 1-7, doi: 10.23919/OCEANS40490.2019.8962851. 

Pasmans, O., A. Kurapov, J. A. Barth, P. M. Kosro, and R. K. Shearman, 2019. Ensemble 4DVAR (En4DVar) data assimilation in a coastal ocean circulation model. Part II: Implementation offshore Oregon-Washington, USA. Ocean Modelling, submitted. 

Barth, J. A., S. E. Allen, E. P. Dever, R. K. Dewey, W. Evans, R. A. Feely, J. Fisher, J. P. Fram, B. Hales, D. Ianson, J. Jackson, K. Juniper, O. Kawka, D. Kelly, J. M. Klymak, J. Konovsky, P. M. Kosro, A. Kurapov, E. Mayorga, P. McCready, J. Newton, R. I. Perry, C. M. Risien, M. Robert, T. Ross, R. K. Shearman, J. Schumacker, S. Siedlecki, V. L. Trainer, S. Waterman, and C. E. Wingard, 2019. Better regional ocean observing through cross-nation cooperation: A case study from the Northeast Pacific. Frontiers in Marine Science, 6:93,

Davis, R. E., L. D. Talley, D. Roemmich, W. B. Owens, D. L. Rudnick, J. Toole, R. Weller, M. J. McPhaden and J. A. Barth, 2019. 100 Years of Progress in Ocean Observing Systems, In “The American Meteorological Society at 100 Years,” Meteorological Monographs, American Meteorological Society,

Trowbridge, J., R. Weller, D. Kelley, E. Dever, A. Plueddemann, J. A. Barth and O. Kawka, 2019. The Ocean Observatories Initiative. Frontiers in Marine Science, 6:74,

Lerczak, J., J. A. Barth, S. Celona, C. Chickadel, J. Colosi, F. Feddersen, M. Haller, S. Haney, L. Lenain, J. MacKinnon, J. MacMahan, K. Melville, A. O'Dea, P. Smit, and A. Waterhouse, 2019. Untangling a web of interactions where surf meets coastal ocean, Eos, 100,

Chan, F., J. A. Barth, K. J. Kroeker, J. Lubchenco, and B. A. Menge, 2019. The dynamics and impact of ocean acidification and hypoxia: Insights from sustained investigations in the northern California Current Large Marine Ecosystem. Oceanography, 32(3), 62-71,

Kroeker, K. J., M. H. Carr, P. T. Raimondi, J. E. Caselle, L. Washburn, S. R. Palumbi, J. A. Barth, F. Chan, B. A. Menge, K. Milligan, M. Novak, and J. W. White, 2019. Planning for change: Assessing the potential role of marine protected areas and fisheries management approaches for resilience management in a changing ocean. Oceanography, 32(3), 116-125,

Lubchenco, J., B. A. Menge, J. A. Barth, M. H. Carr, J. E. Caselle, F. Chan, H. K. Fulton-Bennett, S. D. Gaines, K. J. Kroeker, K. Milligan, S. R. Palumbi, and J. W. White, 2019. Connecting science to policymakers, managers, and citizens. Oceanography, 32(3), 106–115,

Menge, B. A., J. E. Caselle, K. Milligan, S. A. Gravem, T. C. Gouhier, J. W. White, J. A. Barth, C. A. Blanchette, M. H. Carr, F. Chan, J. Lubchenco, M. A. McManus, M. Novak, P. T. Raimondi, and L. Washburn, 2019. Integrating coastal oceanic and benthic ecological approaches for understanding large-scale meta-ecosystem dynamics. Oceanography, 32(3), 38-49, 

Menge, B. A., K. Milligan, J. E. Caselle, J. A. Barth, C. A. Blanchette, M. H. Carr, F. Chan, R. K. Cowen, M. Denny, S. D. Gaines, G. E. Hofmann, K. J. Kroeker, J. Lubchenco, M. A. McManus, M. Novak, S. R. Palumbi, P. T. Raimondi, G. N. Somero, R. R. Warner, L. Washburn, and J. W. White, 2019. PISCO: Advances made through the formation of a large-scale, long-term consortium for integrated understanding of coastal ecosystem dynamics. Oceanography, 32(3), 16–25,

Menge, B. A., J. E. Caselle, J. A. Barth, C. A. Blanchette, M. H. Carr, F. Chan, S. Gravem, T. C. Gouhier, J. Lubchenco, M. A. McManus, K. Milligan, M. Novak, P. T. Raimondi, L. Washburn, and J.W. White. 2019. Community responses to climate-related variability and disease: The critical importance of long-term research. Oceanography, 32(3), 72-81, 

Testor P., B. de Young, D. Rudnick, S. Glenn, D. Hayes, C. M. Lee, C. Pattiaratchi, K. Hill, E. Heslop, V. Turpin, P. Alenius, C. Barrera, J. Barth, N. Beaird, G. Bécu, A. Bosse, F. Bourrin, J. A. Brearley, Y. Chao, S. Chen, J. Chiggiato, L. Coppola, R. Crout, J. Cummings, B. Curry, R. Curry, R. Davis, K. Desai, S. DiMarco, C. Edwards, S. Fielding, I. Fer, E. Frajka-Williams, H. Gildor, G. Goni, D. Gutierrez, P. Haugan, D. Hebert, J. Heiderich, S. Henson, K. Heywood, P. Hogan, L. Houpert, S. Huh, M. E. Inall, M. Ishii, S.-i. Ito, S. Itoh, S. Jan, J. Kaiser, J. Karstensen, B. Kirkpatrick, J. Klymak, J. Kohut, G. Krahmann, M. Krug, S. McClatchie, F. Marin, E. Mauri, A. Mehra, M. P. Meredith, T. Meunier, T. Miles, J. M. Morell, L. Mortier, S. Nicholson, J. O’Callaghan, D. O’Conchubhair, P. Oke, E. Pallás-Sanz, M. Palmer, J. Park, L. Perivoliotis, P. M. Poulain, R. Perry, B. Queste, L. Rainville, E. Rehm, M. Roughan, N. Rome, T. Ross, S. Ruiz, G. Saba, A. Schaeffer, M. Schönau, K. Schroeder, Y. Shimizu, B. Sloyan, D. Smeed, D. Snowden, Y. Song, S. Swart, M. Tenreiro, A. Thompson, J. Tintore, R. E. Todd, C. Toro, H. Venables, T. Wagawa, S. Waterman, R. A. Watlington, and D. Wilson, 2019. OceanGliders: A component of the Integrated GOOS. Frontiers in Marine Science, 6:422,

Todd R. E., F. P. Chavez, S. Clayton, S. Cravatte, M. Goes, M. Graco, X. Lin, J. Sprintall, N. V. Zilberman, M. Archer, J. Arístegui, M. Balmaseda, J. M. Bane, M. O. Baringer, J. A. Barth, L. M. Beal, P. Brandt, P. H. R. Calil, E. Campos, L. R. Centurioni, M. P. Chidichimo, M. Cirano, M. F. Cronin, E. N. Curchitser, R. E. Davis, M. Dengler, B. deYoung, D. Dong, R. Escribano, A. J. Fassbender, S. E. Fawcett, M. Feng, G. J. Goni, A. R. Gray, D. Gutiérrez, D. Hebert, R. Hummels, S-I. Ito, M. Krug, F. Lacan, L. Laurindo, A. Lazar, C. M. Lee, M. Lengaigne, N. M. Levine, J. Middleton, I. Montes, M. Muglia, T. Nagai, H. I. Palevsky, J. B Palter, H. E. Phillips, A. Piola, A. J. Plueddemann, B. Qiu, R. R. Rodrigues, M. Roughan, D. L. Rudnick, R. R. Rykaczewski, M. Saraceno, H. Seim, A. Sen Gupta, L. Shannon, B. M. Sloyan, A. J. Sutton, L. Thompson, A. K. van der Plas, D. Volkov, J. Wilkin, D. Zhang and L. Zhang, 2019. Global perspectives on observing ocean boundary current systems. Frontiers in Marine Science, 6:423,

Schmidt, J. O., S. J. Bograd, H. Arrizabalaga, J. Azevedo, S. J. Barbeaux, J. A. Barth, T. Boyer, S. Brodie, J. J. Cárdenas, S. Cross, J.-N. Druon, A. Fransson, J. Hartog, E. Hazen, A. Hobday, M. Jacox, J. Karstensen, S. Kupschus, J. Lopez, LAS.-P. Madureira, J. E. Martinelli Filho, P. Miloslavich, C. Pereira Santos, K. Scales, S. Speich, M. B. Sullivan, A. Szoboszlai, D. Tommasi, D. Wallace, S. Zador, and P. A. Zawislak, 2019. Future ocean observations to connect climate, fisheries and marine ecosystems. Frontiers in Marine Science, 6:550,

Pasmans, I., A. L. Kurapov, J. A. Barth, A. Ignatov, P. M. Kosro, and R. K. Shearman, 2019. Why gliders appreciate good company: Glider assimilation in the Oregon-Washington coastal ocean 4DVAR system with and without surface observations, J. Geophys. Res., 124,

Smith, L. M., K. Yarincik, L. Vaccari, M. Kaplan, J. A. Barth, G. S. Cram, J. P. Fram, M. Harrington, O. E. Kawka, D. S. Kelley, P. Matthias, K. Newhall, M. Palanza, A. J. Plueddemann, M. F. Vardaro, S. N. White, and R. A. Weller, 2019. Lessons learned from the U.S. Ocean Observatories Initiative. Frontiers in Marine Science, 5:494,

Smith, L. M., J. A. Barth, D. S. Kelley, A. Plueddemann, I. Rodero, G. A. Ulses, M. F. Vardaro, and R. Weller, 2018. The Ocean Observatories Initiative. Oceanography, 31(1), 16-35,

Benoit-Bird, K. J., T. P. Welch, C. M. Waluk, J. A. Barth, I. Wangen, P. McGill, C. Okuda, A. Y. Erofeev, S. D. Pierce, M. Sato, G. Hollinger, and S. McCammon, 2018. An autonomous platform for understanding ocean ecosystems: Equipping an underwater glider with a new quantitative echosounder. Limnol. Oceanogr. Methods, 16, 734-749,

Barth, J. A., J. Fram, E. P. Dever, C. Risien, C. Wingard, R. W. Collier, and T. Kearney, 2018. Warm blobs, low-oxygen events and an eclipse: The Ocean Observatories Initiative Endurance Array captures them all. Oceanography, 31(1), 90-97,

Barth, J.A., C.E. Braby, F. Barcellos, K. Tarnow, A. Lanier, J. Sumich, S. Walker, F. Recht, A. Pazar, L. Xin, A. Galloway,

J. Schaefer, K. Sheeran, C. M. Regula-Whitefield. The Oregon Coordinating Council on Ocean Acidification and

Hypoxia. First Biennial Report. September 2018.

Sato, M., J. A. Barth, K. J. Benoit-Bird, S. D. Pierce, T. J. Cowles, R. D. Brodeur, and W. T. Peterson, 2018. Coastal upwelling fronts as a boundary for planktivorous fish distributions. Mar. Ecol. Prog. Ser.595, 171-186, 

Durski, S. M., J. A. Barth, J. C. McWilliams, H. Frenzel and C. Deutsch, 2017. The influence of variable slope-water characteristics on dissolved oxygen levels in the northern California Current System. J. Geophys. Res., 122, doi:10.1002/2017JC013089.

Chan, F., Barth, J. A., Blanchette, C. A., Byrne, R. H., Chavez, F., Cheriton, O., Feely, R. A., Friederich, G., Gaylord, B., Gouhier, T., Hacker, S., Hill, T., Hofmann, G., McManus, M. A., Menge, B. A., Nielsen, K. J., Russell, A., Sanford, E., Sevadjian, J., and Washburn, L., 2017. Persistent spatial structuring of coastal ocean acidification in the California Current System. Nature Scientific Reports, 7, 2526, doi:10.1038/s41598-017-02777-y.

Keller, A. A., L. Cianelli, W. W. Wakefield, V. Simon, J. A. Barth and S. D. Pierce, 2017. Species-specific responses of demersal fishes to near-bottom oxygen levels within the California Current large marine ecosystem. Mar. Ecol. Prog. Ser., 568, 151-173,

Porter, M., M. E. Inall, J. Hopkins, M. R. Palmer, A. C. Dale, D. Aleynik, J. A. Barth, C. Mahaffey, and D. A. Smeed, 2016. Glider observations of enhanced deep water upwelling at a shelf break canyon: A mechanism for cross-slope carbon and nutrient exchange. J. Geophys. Res., 121, 7575-7588,

Sherman, K., A. Lanier, J. A. Barth, F. Conway, C. Risien and P. M. Kosro, 2016. The Oregon nearshore research inventory project: The importance of science and the scientific community as stakeholders in marine spatial planning. Ocean and Coastal Management, 130, 290-298, doi:


Adams, K., J. A. Barth and R. K. Shearman, 2016. Intraseasonal cross-shelf variability of hypoxia along the Newport, Oregon, Hydrographic line. J. Phys. Oceanogr., 46, 2219-2238, DOI: 10.1175/JPO-D-15-0119.1.


Saldias, G. S., R. K. Shearman, J. A. Barth, and N. Tufillaro, 2016. Optics of the offshore Columbia River plume from glider observations and satellite imagery. J. Geophys. Res., 10.1002/2015JC011431. 

Suanda, S. H. and J. A. Barth, 2015. Semidiurnal baroclinic tides on the central Oregon inner shelf. J. Phys. Oceanogr., 45,

2640-2659, doi:


Mazzini, P. L. F., C. M. Risien, J. A. Barth, S. D. Pierce, A. Erofeev, E. P. Dever, P. M. Kosro, M. D. Levine, R. K. Shearman and M. F. Vardaro, 2015. Anomalous near-surface low-salinity pulses off the central Oregon coast. Nature Scientific Reports, doi:10.1038/srep17145. PDF

Matsumoto, H., J. Haxel, A. Turpin, S. Fregosi, D.K. Mellinger, M. J. Fowler, S. Bauman-Pickering, R. P. Dziak, H. Klinck, K. Klinck, A. Erofeev, J. A. Barth, R.K. Shearman,  and C. Jones, 2015. Simultaneous operation of mobile acoustic recording systems off the Washington coast for cetacean studies: System noise level evaluations. OCEANS 2015 -MTS/IEEE Washington, Washington, DC, pp. 1-7. doi: 10.23919/OCEANS.2015.7401830. PDF

Durski, S. M., A. L. Kurapov, J. S. Allen, P. M. Kosro, G. D. Egbert, R. K. Shearman and J. A. Barth, 2015. Coastal ocean variability in the U.S. Pacific Northwest region: seasonal patterns, winter circulation and the influence of the 2009-2010 El Nino. Ocean Dynamics, 65(12), doi:10.1007/s10236-015-0891-1. PDF

Evans, W., B. Hales, P. G. Strutton, R. K. Shearman and J. A. Barth, 2014. Failure to bloom: Intense upwelling results in negligible phytoplankton response and prolonged CO2 outgassing over the Oregon shelf. J. Geophys. Res., 120, doi:10.1002/2014JC010580.


Keller, A., L. Ciannelli, W. W. Wakefield, V. Simon, J. A. Barth and S. D. Pierce, 2014. Occurrence of demersal fishes in relation to near-bottom oxygen levels within the California current large marine ecosystem. Fisheries Oceanography, 24, 162–176.

Mazzini, P. L. F., J. A. Barth, R. K. Shearman and A. Erofeev, 2014. Buoyancy-driven coastal currents off the Oregon coast during fall and winter. J. Phys. Oceanogr., 44, 2854–2876.

Wu, D., M. Zhou, S. D. Pierce, J. A. Barth and T. Cowles, 2014. Zooplankton distribution and transport in the California Current off Oregon. Mar. Ecol. Prog. Ser., 508, 87–103, doi:10.3354/meps10835. PDF

Suanda, S. H., J. A. Barth, R. A. Holman and J. Stanley, 2014. Shore-based video observations of nonlinear internal waves across the inner shelf. J. Atmos. Oceanic Technol., 31, 714–728. Supplementary movie available at

Mazzini, P. L. F. and J. A. Barth, 2013. A comparison of mechanisms generating vertical velocities in the Brazilian coastal upwelling regions. J. Geophys. Res., 118, doi:10.1002/2013JC008924.


Adams, K. A., J. A. Barth and F. Chan, 2013. Temporal variability of near-bottom dissolved oxygen during upwelling off central Oregon. J. Geophys. Res., 118, doi:10.1002/jgrc.20361.


Lester, S. E., C. Costello, B. S. Halpern, S. D. Gaines, C. White and J. A. Barth, 2012. Evaluating tradeoffs among ecosystem services to inform marine spatial planning. Marine Policy,


Woodson, C. B., M. A. McManus, J. A. Tyburczy, J. A. Barth, L. Washburn, P. T. Raimondi, B. A. Menge, and S. R. Palumbi, 2012. Coastal fronts set recruitment and connectivity patterns across multiple taxa. Limnol. Oceanogr., 57(2), 582–596.


Pierce, S. D., J. A. Barth, R. K. Shearman and A. Y. Erofeev, 2012. Declining oxygen in the Northeast Pacific. J. Phys. Oceanogr., 42, 495-501.


Aguirre, C., O. Pizarro, P. T. Strub, R. Garreaud and J. A. Barth, 2012. Seasonal dynamics of the alongshore flow off central Chile. J. Geophys. Res., 117, C01006, doi:10.1029/2011JC007379.


Suanda, S. H., J. A. Barth and C. B. Woodson, 2011. Diurnal heat balance for the northern Monterey Bay inner shelf. J. Geophys. Res., 116, C09030, doi:10.1029/2010JC006894.


Barshis, D. J., E. E. Sotka, R. P. Kelly, A. Sivasundar, B. A. Menge, J. A. Barth and S. R. Palumbi, 2011. A link between coastal upwelling and temporal genetic variability in the acorn barnacle Balanus glandula. Mar. Ecol. Prog. Ser., 439, 139-150. PDF

Drake, P., T., C. A. Edwards and J. A. Barth, 2011. Dispersion and connectivity estimates along the U.S. west coast from a realistic numerical model. J. Mar. Res., 69, 1-37.

Kim, S. and J. A. Barth, 2011. Connectivity of larval dispersal along the Oregon coast by numerical simulations. J. Geophys. Res., 116, C06002, doi:10.1029/2010JC006741.


Woodson, C. B., J. P. Ryan, M. A. McManus, J. A. Barth, L. Washburn, O. M. Cheriton, and the 2008 Summer Oceanography Group, 2011. Observations of internal wave packets propagating along-shelf in northern Monterey Bay. Geophys. Res. Lett., 38, L01605, doi:10.1029/2010GL045453.

Keller, A., V. Simon, F. Chan, W. W. Wakefield, M. E. Clarke, D. Kamikawa, E. L. Fruh and J. A. Barth, 2010. Demersal fish and invertebrate biomass in relation to an offshore hypoxic zone along the U.S. West Coast. Fisheries Oceanography, 19, 76-87.

Lester, S. E., K. L. McLeod, H. Tallis, M. Ruckelshaus, B. S. Halpern, P. S. Levin, F. P. Chavez, C. Pomeroy, B. J. McCay, C. Costello, S. D. Gaines, A. J. Mace, J. A. Barth, D. L. Fluharty, and J. K. Parrish, 2010. Science in support of ecosystem-based management for the US West Coast and beyond. Conservation Biology, 143, 576-587.


Testor, P., G. Meyers, C. Pattiaratchi , R. Bachmayer, D. Hayes, S. Pouliquen, L. Petit de la Villeon, T. Carval, A. Ganachaud, L. Gourdeau, L. Mortier, H. Claustre, V. Taillandier, P. Lherminier, T. Terre, M. Visbeck, J. Karstensen, G. Krahmann, A. Alvarez, M. Rixen, P.-M. Poulain, S. Osterhus, J. Tintore, S. Ruiz, B. Garau, D. Smeed, G. Griffiths, L. Merckelbach, T. Sherwin, C. Schmid, J. Barth, O. Schofield, S. Glenn, J. Kohut, M. J. Perry, C. Eriksen, U. Send, R. Davis, D. Rudnick, J. Sherman, C. Jones, D. Webb, C. Lee, and B. Owens, 2010. Gliders as a component of future observing systems. In “Proceedings of OceanObs’09: Sustained Ocean Observations and Information for Society (Vol. 2),” Venice, Italy, 21-25 September 2009, Hall, J., Harrison, D. E. and Stammer, D., Eds., ESA WPP-306, doi: 10.5270/OceanObs09.cwp.89

Woodson, C. B., L. Washburn, J. A. Barth, D. J. Hoover, A. R. Kirincich, M. A. McManus, J. P. Ryan and J. Tyburczy, 2009. Northern Monterey Bay upwelling shadow front: Observations of a coastally and surface-trapped buoyant plume. J. Geophys. Res., 114, C12013, doi:10.1029/2009JC005623.

Tapia, F. J., S. A. Navarrete, M. Castillo, B. A. Menge, J. C. Castilla, J. Largier, E. A. Wieters, B. Broitman and J. A. Barth, 2009. Thermal indices of upwelling effects on inner-shelf habitats. Prog. Oceanogr., doi:10.1016/j.pocean.2009.07.035.

Kirincich, A. R., S. J. Lentz and J. A. Barth, 2009. Wave-driven inner-shelf motions on the Oregon coast. J. Phys. Oceanogr., 39, 2942-2956.


Kirincich, A. R. and J. A. Barth, 2009. Spatial and temporal variability of inner-shelf circulation along the central Oregon coast during summer. J. Phys. Oceanogr., 39, 1380–1398.


Juan Jorda, M. J., J. A. Barth, M. E. Clarke and W. W. Wakefield, 2009. Groundfish species associations with distinct oceanographic habitats in the northern California Current. Fisheries Oceanography, 18, 1-19.


Dudas, S. E., B. A. Grantham, A. R. Kirincich, B. A. Menge, J. Lubchenco and J. A. Barth, 2009. Current reversals as      determinants of intertidal recruitment on the central Oregon coast. ICES J. Mar. Sci., 66, 396- 407. PDF


Checkley, D. and J. A. Barth, 2009. Patterns and processes in the California Current System. Prog. Oceanogr.,  doi:10.1016/j.pocean.2009.07.028.


Ainley, D. G., K. D. Dugger, R. G. Ford, S. D. Pierce, D. C. Reese, R. D. Brodeur, C. T. Tynan and J. A. Barth, 2009. Association of predators and prey at frontal features in the California Current: Competition, facilitation, and co-occurrence. Mar. Ecol. Prog. Ser., 389, 271-294. PDF

Kudela, R. M., N. S. Banas, J. A. Barth, E. R. Frame, D. Jay, J. L. Largier, E. J. Lessard, T. D. Peterson and A. J. VanderWoude, 2008. New insights into the controls and mechanisms of plankton productivity in coastal upwelling waters 

of the northern California Current System. Oceanography, 21, 46-59.


Chan, F., J. A. Barth, J. Lubchenco, A. Kirincich, H. Weeks, W. T. Peterson, and B. A. Menge, 2008. Novel emergence of anoxia in the California Current System. Science, 319, 920. 10.1126/science.1149016

Dale, A. C., J. A. Barth, M. D. Levine and J. A. Austin, 2008. Observations of mixed-layer restratification by onshore surface transport following wind reversal in a coastal upwelling region. J. Geophys. Res., 113, C01010,                                     doi:10.1029/2007JC004128.

Woodson, C. B., D. I. Eerkes-Medrano, A. Flores-Morales, M. Foley, S. Henkel, M. Hessing-Lewis, D. Jacinto, L. Needles, 

M. Nishizaki, J. OLeary, C. E. Ostrander, M. Pespeni, K. Schwager, J. A. Tyburczy, K. A. Weersing, A. R. Kirincich, J. A. Barth, M. A. McManus, and L. Washburn, 2007. Diurnal upwelling driven by sea breezes in northern Monterey Bay: A local mechanism for larval delivery to the intertidal? Cont. Shelf. Res., 27, 2289-2302.   PDF

Castelao, R. M. and J. A. Barth, 2007. The role of wind-stress curl in jet separation at a cape. J. Phys. Oceanogr., 37, 2652- 2671.

Barth, J. A., B. A. Menge, J. Lubchenco, F. Chan, J. M. Bane, A. R. Kirincich, M. A. McManus, K. J. Nielsen, S. D. Pierce and L. Washburn, 2007. Delayed upwelling alters nearshore coastal ocean ecosystems in the Northern California Current. Proc. Natl. Acad. Sci., USA, 104, 3719-3724.


Pierce, S. D., J. A. Barth, R. E. Thomas and G. W. Fleischer, 2006. Anomalously warm July 2005 in the northern California Current: Historical context and the significance of cumulative wind stress. Geophys. Res. Lett., 33, L22S04, doi:10.1029/2006GL027149.


Castelao, R. M., T. P. Mavor, J. A. Barth and L. C. Breaker, 2006. Sea-surface temperature fronts in the California Current System from geostationary satellite observations. J. Geophys. Res., 111, C09026, doi:10.1029/2006JC003541.


Castelao, R. M. and J. A. Barth, 2006. The relative importance of wind strength and along-shelf bathymetric variations on the separation of a coastal upwelling jet. J. Phys. Oceanogr., 36, 412-425.


Dale, A. C., M. D. Levine, J. A. Barth, and J. A. Austin, 2006. A dye tracer reveals cross-shelf dispersion and interleaving 

on the Oregon shelf. Geophys. Res. Lett., 33, L03604, doi:10.1029/2005GL024959.


Castelao, R. M. and J. A. Barth, 2006. Upwelling around Cabo Frio, Brazil: The importance of wind stress curl. Geophys. Res. Lett., 33, L03602, doi:10.1029/2005GL025182. 


Castelao, R. M., J. A. Barth and T. P. Mavor, 2005. Flow-topography interactions in the northern California Current System observed from geostationary satellite data. Geophys. Res. Lett., 32, L24612, doi:10.1029/2005GL024401.


Barth, J. A. and P. A. Wheeler, 2005. Introduction to special section: Coastal Advances in Shelf Transport. J. Geophys. Res., 110(C10), C10S01, doi:10.1029/2005JC003124.


Barth, J. A., S. D. Pierce and R. M. Castelao, 2005. Time-dependent, wind-driven flow over a shallow mid-shelf submarine bank. J. Geophys. Res., 110(C10), C10S05, doi:10.1029/2004JC002761.


Kurapov, A. L., J. S. Allen, G. D. Egbert, R. N. Miller, P. M. Kosro, M. D. Levine, T. Boyd, J. A. Barth and J. Moum , 2005. Assimilation of moored velocity data in a model of coastal wind-driven circulation off Oregon: Multivariate capabilities. J.    Geophys. Res., 110(C10), C10S08, doi:10.1029/2004JC002493. 

Kirincich, A. R., J. A. Barth, B. A. Grantham, B. A. Menge and J. Lubchenco, 2005. Wind-driven inner-shelf circulation off central Oregon during summer. J. Geophys. Res., 110(C10), C10S03, doi:10.1029/2004JC002611.

Castelao, R. M. and J. A. Barth, 2005. Coastal ocean response in a region of alongshore bottom topography variations off Oregon during summer upwelling. J. Geophys. Res., 110(C10), C10S04, doi:10.1029/2004JC002409.

Tynan, C. T., D. G. Ainley, J. A. Barth, T. J. Cowles, S. D. Pierce and L. Spear, 2005. Cetacean distributions relative to ocean processes in the northern California Current System. Deep-Sea Res. II, 52, 145-167. PDF

Ressler, P. H., R. D. Brodeur, W. T. Peterson, S. D. Pierce, P. M. Vance, A. R. Roestad and J. A. Barth, 2005. The spatial distribution of euphausiid aggregations in the northern California Current during August 2000. Deep-Sea Res. II, 52, 89-108.

Barth, J. A., S. D. Pierce and T. J. Cowles, 2005. Mesoscale structure and its seasonal evolution in the northern California Current System. Deep-Sea Res. II, 52, 5-28.


Ainley, D. G., L. B. Spear, C. T. Tynan, J. A. Barth, S. D. Pierce, R. G. Ford and T. J. Cowles, 2005. Physical and biological variables affecting seabird distributions during the upwelling season of the northern California Current. Deep-Sea Res. 

II, 52, 123-143. 


Bogucki, D. J., L. G. Redekopp and J. Barth, 2005. Internal solitary waves in the Coastal Mixing and Optics experiment 

1996: Multimodal structure and resuspension. J. Geophys. Res., 110, C02024, doi:10.1029/2003JC002253.


Sotka, E. E., J. P. Wares, J. A. Barth, R. K. Grosberg and S. R. Palumbi, 2004. Strong genetic clines and geographical variation in gene flow in the rocky intertidal barnacle Balanus glandula. Molecular Ecology, 13, 2143-2156.


Ott, M. W., J. A. Barth and A. Y. Erofeev, 2004. Microstructure measurements from a towed undulating platform. J. Atmos. Oceanic Technol., 21, 1621-1632.<1621:MMFATU>2.0.CO;2 


Grantham, B. A., F. Chan, K. J. Nielsen, D. S. Fox, J. A. Barth, A. Huyer, J. Lubchenco and B. A. Menge, 2004. Upwelling- driven nearshore hypoxia signals ecosystem and oceanographic changes in the northeast Pacific. Nature, 429, 749–754. 10.1038/nature02605 

Barth, J. A., D. Hebert, A. C. Dale and D. S. Ullman, 2004. Direct observations of along-isopycnal upwelling and diapycnal velocity at a shelfbreak front. J. Phys. Oceanogr., 34, 543–565.


Barth, J. A., 2003. Anomalous southward advection during 2002 in the northern California Current: Evidence from Lagrangian surface drifters. Geophys. Res. Lett., 30(15), 8024, doi:10.1029/2003GL017511. 


Ullman, D. S., A. C. Dale, D. Hebert and J. A. Barth, 2003. The front on the Northern Flank of Georges Bank in spring: Cross-frontal fluxes and mixing. J. Geophys. Res., 108(C11), 8010, doi:10.1029/2002JC001328. PDF


Dillon, T., J. A. Barth, A. Erofeev, G. May and H. Wijesekera, 2003. MicroSoar: A new instrument for measuring microscale turbulence from rapidly moving submerged platforms. J. Atmos. Oceanic Technol., 20, 1671–1684.<1671:MANIFM>2.0.CO;2


Dale, A. C., D. S. Ullman, J. A. Barth and D. Hebert, 2003. The front on the Northern Flank of Georges Bank in spring: 1. Tidal and subtidal variability. J. Geophys. Res., 108(C11), 8009, doi:10.1029/2002JC001327.


Samelson, R., Barbour, P., Barth, J., Bielli, S., Boyd, T., Chelton, D., Kosro, P., Levine, M., Skyllingstad, E.and J. Wilczak, 2002. Wind stress forcing of the Oregon coastal ocean during the 1999 upwelling season. J. Geophys. Res., 107(C5), 3034, doi:10.1029/2001JC000900. PDF

Rehder, G., R. W. Collier, K. Heeschen, P. M. Kosro, J. Barth and E. Suess, 2002. Enhanced marine CH4 emissions to atmosphere off Oregon caused by coastal upwelling. Global Biogeochemical Cycles, 16(3), 1081, doi:10.1029/2000GB001391.

Oke, P. R., J. S. Allen, R. N. Miller, G. D. Egbert, J. A. Austin, J. A. Barth, T. J. Boyd, P. M. Kosro, and M. D. Levine, 2002. A modeling study of the three-dimensional continental shelf circulation off Oregon. Part I: Model-data comparisons. J. Phys. Oceanogr., 32, 1360–1382.<1360:AMSOTT>2.0.CO;2 


Batchelder, H. P., J. A. Barth, P. M. Kosro, P. T. Strub, R. D. Brodeur, W. T. Peterson, C. T. Tynan, M. D. Ohlman, L. W. Botsford, T. M. Powell, F. B. Schwing, D. G. Ainley, D. L. Mackas, B. M. Hickey and S. R. Ramp, 2002. The Northeast Pacific California Current System program. Oceanography, 15(2), 36–47.


Barth, J. A., T. J. Cowles, P. M. Kosro, R. K. Shearman, A. Huyer and R. L. Smith, 2002. Injection of carbon from the shelf to offshore beneath the euphotic zone in the California Current. J. Geophys. Res., 107(C6), 3057, doi:10.1029/2001JC000956.

Austin, J. A. and J. A. Barth, 2002b. Variation in the position of the upwelling front on the Oregon shelf. J. Geophys. Res., 107(C11), 3180, doi:10.1029/2001JC000858.


Austin, J. A. and J. A. Barth, 2002a. Drifter behavior on the Oregon-Washington shelf during downwelling-favorable winds.  J. Phys. Oceanogr., 32, 3132–3144.<3132:DBOTOW>2.0.CO;2


Mengelt, C., M. R. Abbott, J. A. Barth, R. M. Letelier, C. I. Measures and S. Vink, 2001. Phytoplankton pigment distribution in relation to silicic acid, iron and the physical structure across the Antarctic Polar Front, 170W, during austral summer. Deep-Sea Res. II, 48, 4081–4100.


Dale, A. C. and J. A. Barth, 2001. The hydraulics of an upwelling jet flowing around a cape. J. Phys. Oceanogr., 31, 226–243.<0226:THOAEU>2.0.CO;2


Barth, J. A., T. J. Cowles and S. D. Pierce, 2001. Mesoscale physical and bio-optical structure of the Antarctic Polar Front near 170◦W during spring. J. Geophys. Res., 106, 13,879–13,902. PDF

Shearman, R. K., J. A. Barth, J. S. Allen and R. L. Haney, 2000. Diagnosis of the three-dimensional circulation in mesoscale features with large Rossby number. J. Phys. Oceanogr., 30, 2687–2709. PDF    

Van Geen, A., R. K. Takesue, J. Goddard, T. Takahashi, J. A. Barth and R. L. Smith, 2000. Carbon and nutrient dynamics during coastal upwelling off Cape Blanco, Oregon. Deep-Sea Res. II, 47, 975–1002.


Pierce, S. D., R. L. Smith, P. M. Kosro, J. A. Barth and C. D. Wilson, 2000. Continuity of the poleward undercurrent along the eastern boundary of the mid-latitude north Pacific. Deep-Sea Res. II, 47, 811–829. PDF 

Barth, J. A., S. D. Pierce and R. L. Smith, 2000. A separating coastal upwelling jet at Cape Blanco, Oregon and its connection to the California Current System. Deep-Sea Res. II, 47, 783–810.  PDF

Barth, J. A. and D. J. Bogucki, 2000. Spectral light absorption and attenuation measurements from a towed undulating vehicle. Deep-Sea Res., 47, 323–342. PDF

Shearman, R. K., J. A. Barth and P. M. Kosro, 1999. Diagnosis of the three-dimensional circulation associated with mesoscale motion in the California Current. J. Phys. Oceanogr., 29, 651–670.  PDF


Ryan, J. P., J. A. Yoder, J. A. Barth and P. C. Cornillon, 1999. Chlorophyll enhancement and mixing associated with meanders of the shelfbreak front in the Mid-Atlantic Bight. J. Geophys. Res., 104, 23,479–23,493.


Pierce, S. D., J. A. Barth and R. L. Smith, 1999. Improving acoustic Doppler current profiler accuracy with wide-area differential GPS and adaptive smoothing of ship velocity. J. Atmos. Oceanic Technol., 16, 591–596.<0591:IADCPA>2.0.CO;2


Miller, A. J., J. C. McWilliams, N. Schneider, J. S. Allen, J. A. Barth, R. C. Beardsley, T. K. Chereskin, C. A. Edwards, R. L. Haney, K. A. Kelly, J. C. Kindle, L. N. Ly, J.R. Moisan, M. A. Noble, P. P. Niiler, L. Y. Oey, F. B. Schwing, R. K. Shearman and M. S. Swenson, 1999. Observing and modeling the California Current System: Purposes, achievements and aspirations. Eos, Transactions, American Geophysical Union, 80(45), 533–539. PDF

Huyer, A., J. A. Barth, P. M. Kosro, R. K. Shearman and R. L. Smith, 1998. Upper-ocean water mass characteristics of the California current, Summer 1993. Deep-Sea Res. II, 45, 1411–1442.


Barth, J.A. and R. L. Smith, 1998. Separation of a coastal upwelling jet at Cape Blanco, Oregon, USA. In Benguela Dynamics: Impacts of Variability on Shelf-Sea Environments and their Living Resources. Pillar, S. C., Moloney, C. L., Payne, A. I. L. and F. A. Shillington (Eds). S. Afr. J. Mar. Sci., 19, 5–14. 

Barth, J. A., D. Bogucki, S. D. Pierce and P. M. Kosro, 1998. Secondary circulation associated with a shelfbreak front. Geophys. Res. Lett., 25, 2761–2764.


Kosro, P. M., J. A. Barth and P. T. Strub, 1997. The coastal jet: Observations of surface currents over the Oregon continental shelf from HF radar. Oceanography, 10, 53–56.


Barth, J.A., 1994. Short-wavelength instabilities on coastal jets and fronts. J. Geophys. Res., 99, 16095–16115.

Strub, P.T., P.M. Kosro, A. Huyer and CTZ Collaborators, 1991. The nature of the cold filaments in the California current system. J. Geophys. Res., 96, 14743–14768.  PDF

Allen, J.S., J.A. Barth and P.A. Newberger, 1990. On intermediate models for barotropic continental shelf and slope flow fields: Part III. Comparison of numerical model solutions in periodic channels. J. Phys. Oceanogr., 20, 1949–1973.<1044:OIMFBC>2.0.CO;2 


Barth, J.A., J.S. Allen and P.A. Newberger, 1990. On intermediate models for barotropic continental shelf and slope flow fields: Part II. Comparison of numerical model solutions in doubly-periodic domains. J. Phys. Oceanogr., 20, 1044–1076.<1044:OIMFBC>2.0.CO;2 


Allen, J.S., J.A. Barth and P.A. Newberger, 1990. On intermediate models for barotropic continental shelf and slope flow fields: Part I. Formulation and comparison of exact solutions. J. Phys. Oceanogr., 20, 1017–1042.<1044:OIMFBC>2.0.CO;2 


Barth, J.A., 1989. Stability of a coastal upwelling front: Part II. Model results and comparison with observations. J. Geophys. Res., 94, 10857–10883.


Barth, J.A., 1989. Stability of a coastal upwelling front: Part I. Model development and a stability theorem. J. Geophys. Res., 94, 10844–10856.  

Barth, J.A. and K.H. Brink, 1987. Shipboard acoustic Doppler profiler velocity observations near Point Conception: Spring 1983. J. Geophys. Res., 92, 3925–3943. 


Chapman, D.C., J.A. Barth, R.C. Beardsley and R.G. Fairbanks, 1986. On the continuity of mean flow between the Scotian Shelf and the Middle Atlantic Bight. J. Phys. Oceanogr., 16, 758–772.<0758:OTCOMF>2.0.CO;2  PDF

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